Index

A

agg_data() (in module dataset) agg_parcels() (in module dataset) Atlas (class in atlas_map) AtlasMap (class in atlas_map) AtlasMapDeform (class in atlas_map)

AtlasMapSurf (class in atlas_map) AtlasSurface (class in atlas_map) AtlasSurfaceSymmetric (class in atlas_map) AtlasVolumeSymmetric (class in atlas_map) AtlasVolumetric (class in atlas_map)

B

between_subj() (in module reliability) between_subj_loo() (in module reliability)

build() (atlas_map.AtlasMapDeform method) (atlas_map.AtlasMapSurf method)

C

calculate_symmetry() (atlas_map.AtlasSurfaceSymmetric method) (atlas_map.AtlasVolumeSymmetric method) centering() (in module matrix)

cifti_to_data() (atlas_map.AtlasSurface method) condense_data() (dataset.DataSet method) correlate() (in module util)

D

data_to_cifti() (atlas_map.AtlasSurface method) (atlas_map.AtlasVolumetric method) data_to_nifti() (atlas_map.AtlasVolumetric method) DataSet (class in dataset) DataSetCifti (class in dataset)

DataSetMDTB (class in dataset) DataSetMNIVol (class in dataset) DataSetNative (class in dataset) decompose_subj_group() (in module reliability) deform_data() (in module atlas_map)

E

extract_all() (dataset.DataSet method) (dataset.DataSetCifti method)

extract_data_group() (atlas_map.AtlasMap method) extract_data_native() (atlas_map.AtlasMap method)

F

file_nii_or_gz() (in module util)

G

get_atlas() (in module atlas_map) get_atlasmaps() (dataset.DataSet method) (dataset.DataSetMNIVol method) (dataset.DataSetNative method) get_brain_model_axis() (atlas_map.AtlasSurface method) (atlas_map.AtlasVolumetric method) get_data() (dataset.DataSet method) get_data_cifti() (in module atlas_map) get_data_fnames() (dataset.DataSet method) (dataset.DataSetCifti method) get_data_nifti() (in module atlas_map) get_dataset() (in module dataset) get_dataset_class() (in module dataset) get_deform() (in module atlas_map) get_hemisphere() (atlas_map.AtlasSurface method)

get_info() (dataset.DataSet method) get_parcel() (atlas_map.Atlas method) (atlas_map.AtlasSurface method) get_parcel_axis() (atlas_map.AtlasSurface method) (atlas_map.AtlasVolumetric method) get_participants() (dataset.DataSet method) get_subatlas() (atlas_map.Atlas method) (atlas_map.AtlasSurface method) (atlas_map.AtlasVolumetric method) get_subatlas_circle() (atlas_map.AtlasSurface method) get_subatlas_image() (atlas_map.AtlasSurface method) (atlas_map.AtlasVolumetric method) get_subatlas_sphere() (atlas_map.AtlasVolumetric method) get_volumes() (in module util) group_average_data() (dataset.DataSet method)

I

indicator() (in module matrix)

M

map_native_to_group() (atlas_map.AtlasMap method) matrix module

module matrix util

N

nan_linear_model() (in module util)

O

optimal_contrast() (in module dataset)

P

pairwise_contrast() (in module matrix) pairwise_contrast_sparse() (in module matrix)

parcel_recombine() (in module atlas_map) prewhiten_data() (in module dataset)

R

read_data() (atlas_map.AtlasSurface method) (atlas_map.AtlasVolumetric method)

reliability_maps() (in module dataset) row_col_indicator_G() (in module matrix) row_col_indicator_RDM() (in module matrix)

S

sample_nifti() (atlas_map.AtlasVolumetric method) save_as_image() (atlas_map.AtlasMap method) smooth_fs32k_data() (in module util)

split_string() (in module util) sq_eucl_distances() (in module util) surf_from_cifti() (in module util)

U

util module

V

volume_from_cifti() (in module util)

W

within_subj() (in module reliability)

within_subj_loo() (in module reliability)